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Interactive checklist for every phase of your thesis
1. Introduction 2. Foundations of Topological Data Analysis 2.1 Historical Background 2.2 Key Concepts and Techniques 2.3 Tools and Software Used 3. Overview of Computational Biology 3.1 Definition and Scope 3.2 Emerging Trends 3.3 Challenges Faced 4. Integration of TDA in Computational Biology 4.1 Rationale for Integration 4.2 Methodological Approaches 4.3 Case Studies Highlighting Integration 5. Applications in Genomic Data Analysis 5.1 DNA Sequencing Insights 5.2 Pattern Recognition in Genomics 5.3 Genomic Data Clustering 6. Applications in Protein Structure Analysis 6.1 Protein Folding Studies 6.2 Structural Motif Identification 6.3 Analysis of Protein Complexes 7. Topological Insights into Cellular Processes 7.1 Cellular Network Analysis 7.2 Single-cell Data Exploration 7.3 Topological Studies of Metabolomics 8. Future Directions and Innovations 8.1 Emerging Research Trends 8.2 Interdisciplinary Collaborations 8.3 Potential Technological Advances 9. Conclusion
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